STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_020458Ubiquitin-conjugating enzyme E2-22 kDa; Belongs to the ubiquitin-conjugating enzyme family. (199 aa)    
Predicted Functional Partners:
APZ42_033595
Ubiquitin modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.993
APZ42_005620
Ubiquitin-40S ribosomal protein S27a.
    
 0.989
APZ42_031040
Ubiquitin-60S ribosomal protein L40.
   
 0.987
APZ42_005840
Polyubiquitin-B.
    
 0.976
APZ42_021729
Polyubiquitin-B.
    
 0.976
EOG090X0I8J
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.956
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.950
APZ42_026730
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
 
0.948
APZ42_011695
Ubiquitin protein 4A.
    
 0.948
APZ42_033296
Protein FAM89A-like protein.
    
 0.943
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.