STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_023974Cathepsin l protein; Belongs to the peptidase C1 family. (332 aa)    
Predicted Functional Partners:
APZ42_011592
Uncharacterized protein.
   
 0.737
APZ42_033126
Cathepsin O; Belongs to the peptidase C1 family.
  
0.697
APZ42_031946
Putative Cysteine proteinase; Belongs to the peptidase C1 family.
   
0.668
APZ42_014501
Cathepsin B; Belongs to the peptidase C1 family.
  
0.655
APZ42_023525
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.645
APZ42_012379
Apoptotic Protease-activating factor 1.
   
 0.643
APZ42_033257
Targeting protein for Xklp2-A.
   
 0.633
APZ42_019691
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
0.631
APZ42_034121
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 0.626
APZ42_034136
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 0.626
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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