STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014757Telomere-associated protein RIF1. (1750 aa)    
Predicted Functional Partners:
APZ42_033871
Leucine-rich repeat kinase.
    
 0.799
APZ42_018837
Mutator-like protein.
   
 0.706
APZ42_027863
Tonsoku protein.
    
 0.701
APZ42_016304
Tonsoku-like protein.
    
 0.701
APZ42_017653
Putative PAX-interacting protein 1.
    
 0.692
APZ42_026388
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.669
APZ42_022851
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.669
APZ42_016878
DNA replication factor Cdt1.
   
   0.666
APZ42_013658
BRCT domain-containing protein.
    
 0.664
EOG090X04PU
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.651
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.