STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_030615Retinoid-and fatty acid-binding glycoprotein. (3140 aa)    
Predicted Functional Partners:
APZ42_032293
Microsomal triglyceride transfer protein large subunit.
   
 0.860
APZ42_030649
Sortilin-related receptor.
    
 0.768
APZ42_020149
Calreticulin.
    
 0.603
APZ42_034126
Very Low-density lipoprotein receptor.
    
 0.600
APZ42_025753
Low-density lipoprotein receptor-related protein 6.
    
 0.600
APZ42_010850
Putative Vitellogenin receptor.
    
 0.600
APZ42_001817
Low-density lipoprotein receptor-related protein 2.
    
 0.600
APZ42_034371
Vitellogenin receptor.
    
 0.600
APZ42_032505
Low-density lipoprotein receptor-related protein 6.
    
 0.600
APZ42_028941
Low-density lipoprotein receptor-related protein 2.
    
 0.600
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.