STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_020792RNA-binding protein 10. (820 aa)    
Predicted Functional Partners:
APZ42_028328
SURP and G-patch domain-containing protein.
    
 0.952
APZ42_016659
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
0.939
APZ42_030507
Pre-mRNA-splicing factor ATP-dependent RNA Helicase DHX15.
   
 0.899
APZ42_022854
Putative ATP-dependent RNA helicase DHX33.
    
 0.879
APZ42_026384
RNA helicase.
    
 0.878
APZ42_012475
G patch domain and KOW motifs-containing protein.
   
 
 0.875
APZ42_030956
Nucleolar protein 6.
    
 
 0.862
APZ42_017444
U3 small nucleolar RNA-associated protein 6.
    
 
 0.861
APZ42_026408
Ribosomal RNA processing protein 36.
   
   0.855
APZ42_029822
Putative Nucleolar MIF4G domain-containing protein.
   
   0.854
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.