STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_016549ABC transporter G family member. (782 aa)    
Predicted Functional Partners:
APZ42_026033
Immunoglobulin-binding protein 1.
    
  0.577
APZ42_002277
Putative Abc transporter.
    
 
0.544
APZ42_014245
FAD synthase.
     
 0.486
APZ42_023418
Putative FAD synthase.
     
 0.486
APZ42_018388
Alpha-enolase.
   
 
 0.478
APZ42_002193
Cytochrome C oxidase assembly protein COX15.
    
 0.468
APZ42_016876
Bile acid receptor.
    
  0.455
RXR
Retinoic acid receptor RXR-alpha-A.
    
  0.455
APZ42_008919
JmjC domain-containing protein.
    
 
 0.443
APZ42_010943
UTP--glucose-1-phosphate uridylyltransferase.
    
  0.435
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.