STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_013694t-SNARE domain-containing protein; Belongs to the syntaxin family. (278 aa)    
Predicted Functional Partners:
APZ42_016501
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
   
 0.977
EOG090X0HBC
EOG090X0HBC; Belongs to the synaptobrevin family.
    
 0.963
APZ42_033020
Alpha-soluble NSF attachment protein.
    
 0.962
APZ42_026018
Vesicle-associated membrane protein 7.
   
 0.960
APZ42_029114
Vesicle transport through interaction with t-SNAREsA.
   
 0.943
APZ42_016928
Vesicle transport through interaction with t-SNAREsB.
   
 0.942
APZ42_027306
Syntaxin-8.
    
 0.929
APZ42_022228
Vesicle-fusing ATPase.
   
 0.914
APZ42_015885
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.909
APZ42_019575
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.906
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (20%) [HD]