STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_013275Zinc finger CCCH-type with G patch domain-containing protein. (476 aa)    
Predicted Functional Partners:
APZ42_012049
Precursor RNA processing 3.
   
   0.741
APZ42_020836
Mitochondrial carnitine/acylcarnitine carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
    
 0.706
APZ42_029855
U4/U6 small nuclear ribonucleoprotein Prp4.
    
   0.612
APZ42_018479
E3 ubiquitin-protein ligase MARCH6.
   
  
 0.581
APZ42_020315
DnaJ protein subfamily C member.
   
  
 0.581
APZ42_023976
ADP-ribosylation factor-related protein 1.
   
  
 0.523
APZ42_014230
Putative Calcium-independent phospholipase A2-gamma.
 
      0.519
APZ42_030507
Pre-mRNA-splicing factor ATP-dependent RNA Helicase DHX15.
    
   0.456
APZ42_015629
Uncharacterized protein.
      
 0.416
APZ42_017731
Protein ESF1.
   
    0.400
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.