STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014166Epimerase family protein SDR39U1. (312 aa)    
Predicted Functional Partners:
APZ42_018618
Hydroxysteroid dehydrogenase 2-like protein; Belongs to the G-protein coupled receptor 1 family.
  
  
 0.558
APZ42_030783
Hydroxysteroid dehydrogenase protein 2.
  
  
 0.558
APZ42_029245
Nicalin-1.
      
 0.531
APZ42_034207
Integrase_H2C2 domain-containing protein.
      
 0.528
APZ42_021627
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
    0.503
APZ42_023586
Zinc transporter ZIP13.
  
    0.483
APZ42_033258
Putative Zinc transporter ZIP10.
  
    0.483
APZ42_011281
Zinc transporter ZIP13.
  
    0.483
APZ42_026611
Zinc transporter ZIP11.
  
    0.483
APZ42_030799
Xylose isomerase.
      
 0.457
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.