STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_022562Nucleosome-remodeling factor subunit NURF301. (2231 aa)    
Predicted Functional Partners:
APZ42_012182
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member.
   
 
 0.975
APZ42_017650
Histone-binding protein RBBP4.
    
 
 0.940
APZ42_023864
Nipped-B protein.
   
    0.856
APZ42_013650
Inorganic pyrophosphatase/nucleosome remodeling factor subunit NURF38.
    
 
 0.804
APZ42_024909
PHD finger protein.
   
   
0.792
APZ42_016706
Putative Histone-lysine N-methyltransferase.
   
 
 0.706
APZ42_013659
Putative Lymphoid-specific Helicase.
    
 
 0.700
APZ42_005630
annotation not available
    
 
 0.700
APZ42_020988
Putative Cat eye Syndrome critical region protein.
     
 
0.690
APZ42_014828
Uncharacterized protein.
   
    0.655
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.