STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_021375Btb/poz domain-containing protein. (347 aa)    
Predicted Functional Partners:
APZ42_016484
Cullin-3; Belongs to the cullin family.
   
 0.725
APZ42_017914
Cullin-5; Belongs to the cullin family.
   
 0.725
APZ42_005620
Ubiquitin-40S ribosomal protein S27a.
    
  0.532
APZ42_032746
Suppressor of fused homolog.
     
 0.523
APZ42_009245
BTB domain-containing protein.
  
     0.515
APZ42_019436
26S Protease regulatory subunit 4; Belongs to the AAA ATPase family.
    
  0.506
APZ42_014756
Regulatory particle triple-A ATPase 6-related protein; Belongs to the AAA ATPase family.
    
  0.506
APZ42_025525
Putative Class c scavenger receptor sushi/scr/ccp.
  
     0.489
APZ42_024328
Speckle-type POZ-like protein.
  
     0.479
APZ42_026730
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.473
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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