STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_027034Sushi domain-containing protein 2. (1295 aa)    
Predicted Functional Partners:
APZ42_012230
Chitin deacetylase 1.
  
  
  0.583
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
      
 0.577
APZ42_029335
Integrin alpha-PS2; Belongs to the integrin alpha chain family.
  
  
 0.540
APZ42_002518
Putative 7-dehydrocholesterol reductase.
     
 0.528
APZ42_018369
LBR_tudor domain-containing protein.
     
 0.525
APZ42_030296
7-dehydrocholesterol reductase.
     
 0.521
APZ42_022199
Nucleoporin 2-like protein.
     
 0.504
APZ42_012096
Uncharacterized protein.
     
 0.504
APZ42_032686
Hemolectin.
     
 0.504
APZ42_020900
Uncharacterized protein.
     
 0.504
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.