STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOG090X0F7FEOG090X0F7F. (310 aa)    
Predicted Functional Partners:
APZ42_029594
Putative U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.948
APZ42_015980
Pre-mRNA-processing-splicing factor 8.
    
 
 0.931
APZ42_026161
Pre-mRNA-splicing factor SLU7.
   
 
 0.872
APZ42_027273
Mediator of RNA polymerase II transcription subunit 22.
   
  
 0.863
APZ42_030969
Pre-mRNA-splicing factor 38A.
   
  
 0.820
APZ42_018953
NF-kappa-B-activating-like protein.
   
 
  0.795
APZ42_013114
UPF0428 protein CXorf56.
  
  
 0.760
APZ42_002289
Putative Pre-mRNA-splicing factor CWC22.
    
 0.743
APZ42_015626
Uncharacterized protein.
    
  0.727
APZ42_029500
Superkiller viralicidic activity 2 2.
    
  0.716
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.