STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_021972Putative Zinc-finger protein drumstick. (76 aa)    
Predicted Functional Partners:
APZ42_033871
Leucine-rich repeat kinase.
    
 0.782
APZ42_026444
MAM domain-containing glycosylphosphatidylinositol anchor protein 1.
    
 0.759
APZ42_028391
Transcription factor AP-1.
   
 0.625
APZ42_016916
Mitogen-activated protein kinase.
    
 0.609
APZ42_023626
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
 0.603
APZ42_026392
TATA-box-binding protein.
    
 0.597
APZ42_027164
Putative Proto-oncogene C-Rel.
    
 0.597
APZ42_031668
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.594
APZ42_032746
Suppressor of fused homolog.
    
  0.594
APZ42_026295
BRCA1-associated RING domain protein 1.
    
  0.591
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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