STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_019259Putative TBC1 domain family member. (1198 aa)    
Predicted Functional Partners:
APZ42_024781
Ras-related protein Rab-14.
    
 0.864
APZ42_012229
Ras-related protein Rab-11A.
    
 0.832
APZ42_013831
Non-specific serine/threonine protein kinase.
    
 0.823
APZ42_011511
Ras-related protein Rab-2.
    
 0.816
APZ42_019487
Non-specific serine/threonine protein kinase.
     
 0.764
APZ42_010947
5'-AMP-activated protein kinase subunit beta-1.
     
 0.756
APZ42_012420
Ras-related protein Rab-8A.
    
 0.748
APZ42_013174
Ras-related protein Rab-10.
    
 0.748
APZ42_030282
Uncharacterized protein.
    
 0.742
APZ42_029101
RabX6.
    
 0.703
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.