STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_018742Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (1010 aa)    
Predicted Functional Partners:
APZ42_022261
Anaphase promoting complex subunit 4.
   
 0.951
APZ42_011351
Cell division cycle protein 16.
   
 0.948
APZ42_017012
Anaphase-promoting complex subunit 1.
    
 0.945
APZ42_005107
Alanyl-tRNA synthetase.
 
     0.944
APZ42_014888
Anaphase-promoting complex subunit 5.
   
 0.942
APZ42_012799
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.938
APZ42_021587
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.935
APZ42_010917
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.923
APZ42_033296
Protein FAM89A-like protein.
    
 0.918
APZ42_012972
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
 0.907
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.