STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_001808Glutamate-gated chloride channel. (60 aa)    
Predicted Functional Partners:
APZ42_015468
Putative Integrin alpha-ps; Belongs to the integrin alpha chain family.
     
 0.500
APZ42_017991
Integrin alpha-PS3; Belongs to the integrin alpha chain family.
     
 0.500
APZ42_029335
Integrin alpha-PS2; Belongs to the integrin alpha chain family.
     
 0.500
APZ42_015460
Integrin alpha-PS4; Belongs to the integrin alpha chain family.
     
 0.500
APZ42_026234
Integrin alpha-PS1; Belongs to the integrin alpha chain family.
     
 0.500
APZ42_033991
Gamma-aminobutyric acid receptor subunit gamma-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
  0.495
APZ42_021017
Gamma-aminobutyric acid receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
  0.495
APZ42_005226
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 
 0.488
APZ42_026819
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 
 0.488
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.