STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_001203Methyltranfer_dom domain-containing protein. (331 aa)    
Predicted Functional Partners:
APZ42_014292
WD repeat-containing protein mio.
    
 0.921
APZ42_029344
Peroxin 7.
    
 0.874
APZ42_031429
WD repeat-containing protein 59.
    
 0.849
APZ42_015305
Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.
     
 0.799
EOG090X07N7
SEC13 protein; Belongs to the WD repeat SEC13 family.
     
 0.764
APZ42_034552
Integrin-alpha FG-GAP repeat-containing protein 2.
     
 0.585
APZ42_023537
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.570
APZ42_015425
Mpv17-like protein.
    
 0.557
APZ42_031949
DEP domain-containing protein 5.
     
 0.554
APZ42_021850
Nitrogen permease regulator 3-like protein.
     
 0.554
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.