STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_031706Acetylcholine receptor subunit alpha. (577 aa)    
Predicted Functional Partners:
APZ42_011225
Neuronal acetylcholine receptor subunit alpha-9.
  
0.757
APZ42_002838
Glycine receptor subunit alpha-3.
  
  
  0.592
APZ42_028256
Histamine-gated chloride channel subunit 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
  
  0.548
APZ42_025801
Glycine receptor subunit alpha-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
  
  0.530
APZ42_012137
Glutamate receptor ionotropic, NMDA.
   
 
 0.529
APZ42_020558
Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.522
APZ42_020568
Tyrosine-protein kinase.
    
  0.522
APZ42_031742
Glutamate-gated chloride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
  
  0.515
APZ42_023748
Tyrosine-protein kinase.
    
  0.502
APZ42_033741
Transmembrane protein.
    
  0.502
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.