STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_030480Putative Tetratricopeptide repeat protein 25. (1367 aa)    
Predicted Functional Partners:
APZ42_025261
Uncharacterized protein.
   
 
 0.841
APZ42_030629
Gudu.
    
 
 0.838
APZ42_017748
EF-hand calcium-binding domain-containing protein.
   
 0.828
APZ42_033871
Leucine-rich repeat kinase.
   
 0.781
APZ42_015102
Glutamate receptor Delta-2 subunit.
    
 0.776
APZ42_027225
Bardet-Biedl Syndrome 7 protein.
    
 0.761
APZ42_022808
Tetratricopeptide repeat protein 8.
    
  0.758
APZ42_027349
Tektin-1 protein.
   
 
 0.743
APZ42_011351
Cell division cycle protein 16.
    
 0.729
APZ42_022261
Anaphase promoting complex subunit 4.
    
 0.728
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.