STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_024544Putative CCR4-NOT transcription complex subunit. (733 aa)    
Predicted Functional Partners:
APZ42_025064
CCR4-NOT transcription complex subunit.
    
 0.999
EOG090X09A7
Cell differentiation protein RCD1.
    
 0.999
APZ42_023758
CCR4-NOT transcription complex subunit.
    
0.998
APZ42_030617
CCR4-NOT transcription complex subunit.
   
 0.996
APZ42_025991
PAT1 1 protein.
    
 
 0.978
APZ42_018002
CCR4-NOT transcription complex subunit.
    
 0.974
APZ42_020416
CCR4-NOT transcription complex subunit 10.
    
 0.959
APZ42_016013
Uncharacterized protein.
    
 0.957
APZ42_021901
CCR4-NOT transcription complex subunit 6.
    
 0.957
APZ42_014605
2',5'-phosphodiesterase 12.
    
 0.952
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.