STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_015793Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (261 aa)    
Predicted Functional Partners:
APZ42_016086
Sel-1.
   
 0.999
EOG090X03TK
E3 ubiquitin-protein ligase synoviolin.
    
 0.998
APZ42_029247
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
0.995
APZ42_031953
Endoplasmic reticulum lectin 1.
    
 0.995
APZ42_018430
Uncharacterized protein.
   
 0.985
APZ42_026192
Nuclear protein localization protein 4.
    
 
 0.982
APZ42_025760
Spermatogenesis-associated 5 protein 1-like protein.
   
 0.965
APZ42_020232
Spermatogenesis-associated protein 5 protein 1.
   
 0.965
APZ42_034075
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
   
 0.965
APZ42_008911
Ubiquitin fusion degradation protein 1.
    
 
 0.948
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.