STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_015934CXXC-type zinc finger 4-like protein. (1598 aa)    
Predicted Functional Partners:
APZ42_026322
Putative Segment polarity protein dishevelled.
    
 0.800
APZ42_033012
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit.
   
 
 0.715
APZ42_028347
Purine nucleoside phosphorylase.
     
 0.632
APZ42_029282
S-methyl-5'-thioadenosine phosphorylase.
     
 0.613
APZ42_031074
Putative Shn zinc finger protein.
      
 0.573
APZ42_011834
Harmonin usher syndrome protein pdz domain-containing protein.
      
 0.565
APZ42_023825
Spalt-like protein.
      
 0.554
APZ42_025707
Uncharacterized protein.
      
 0.550
APZ42_022979
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.517
APZ42_012101
Mortality factor 4 1-like protein.
    
 
 0.508
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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