STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014784Neurogenic differentiation factor 4-like protein. (319 aa)    
Predicted Functional Partners:
APZ42_029061
Class E basic helix-loop-helix 40-like protein.
  
 
 0.712
APZ42_010983
Homeobox unplugged-like protein.
  
 0.685
APZ42_002871
Uncharacterized protein.
    
 
 0.685
APZ42_023386
Putative Daughterless protein.
    
 
 0.685
APZ42_020324
Putative Transcription factor HES-2.
    
 0.652
APZ42_019459
Hairy enhancer of split-like 1.
    
 0.652
APZ42_029475
Putative Insulinoma-associated protein.
   
 0.634
APZ42_029032
E region transcript mgamma.
    
 0.624
APZ42_014312
Basic helix-loop-helix neural transcription factor TAP.
     
0.552
APZ42_031959
Forkhead box J3-like protein.
   
  
 0.543
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.