STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014494WD_REPEATS_REGION domain-containing protein. (202 aa)    
Predicted Functional Partners:
APZ42_026180
Nucleoporin Nup37.
   
 0.999
APZ42_023172
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
APZ42_015305
Nucleoporin at 44A; Belongs to the WD repeat SEC13 family.
   
 0.999
APZ42_022409
Nuclear pore complex protein Nup133.
   
 0.999
APZ42_015077
Nuclear pore protein.
   
 0.999
EOG090X07N7
SEC13 protein; Belongs to the WD repeat SEC13 family.
   
 0.999
APZ42_031762
E3 SUMO-protein ligase RanBP2.
   
 0.999
APZ42_030621
Nuclear pore complex protein Nup160.
   
 0.999
APZ42_026668
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
APZ42_018104
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
   
 0.996
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (16%) [HD]