STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014108Putative Allantoicase. (409 aa)    
Predicted Functional Partners:
APZ42_024497
Amidohydro-rel domain-containing protein.
 
 0.992
EOG090X0NTN
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.893
APZ42_033818
Dihydropyrimidinase-related protein 5.
  
 
 0.877
APZ42_025519
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
 0.863
APZ42_027163
Peroxisomal biogenesis factor.
    
 0.830
APZ42_011578
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
 
  
 0.828
APZ42_027021
Dynein light chain.
     
 0.748
APZ42_016262
Dynein light chain.
     
 0.748
APZ42_012245
Peroxisomal membrane protein 11C.
   
 0.739
EOG090X0AIN
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.737
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.