STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014125UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (367 aa)    
Predicted Functional Partners:
APZ42_025833
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
  
 0.997
APZ42_022375
N-acetylgalactosamine kinase.
  
 0.976
APZ42_016705
Galactokinase.
  
 0.973
APZ42_021347
Putative Chondroitin proteoglycan-2.
  
 0.959
APZ42_010943
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.947
APZ42_011383
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.943
APZ42_002497
Uncharacterized protein.
  
 
 0.897
APZ42_012357
UDP-N-acetylhexosamine pyrophosphorylase 1-like protein.
    
 0.854
APZ42_014483
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
    
  0.848
APZ42_026248
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.830
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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