STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014080ATP-dependent DNA helicase; Belongs to the helicase family. (890 aa)    
Predicted Functional Partners:
APZ42_001907
ZnF_CHCC domain-containing protein.
  
 
 0.535
APZ42_018111
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.514
APZ42_031912
Putative ATP-dependent RNA helicase DHX58.
   
 
 0.489
APZ42_032613
Replication protein A 14 kDa subunit.
    
   0.447
APZ42_008990
Uncharacterized protein.
 
     0.446
APZ42_004364
Uncharacterized protein.
  
     0.425
APZ42_029230
Uncharacterized protein.
  
     0.425
APZ42_023587
Origin recognition complex subunit.
    
 
 0.420
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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