STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_013992Uncharacterized protein. (1323 aa)    
Predicted Functional Partners:
APZ42_033871
Leucine-rich repeat kinase.
    
 0.701
APZ42_005620
Ubiquitin-40S ribosomal protein S27a.
    
  0.647
APZ42_027863
Tonsoku protein.
    
 0.630
APZ42_016304
Tonsoku-like protein.
    
 0.630
APZ42_031912
Putative ATP-dependent RNA helicase DHX58.
    
  0.587
APZ42_003369
ANK_REP_REGION domain-containing protein.
    
 0.584
APZ42_018038
Inactive tyrosine-protein kinase 7.
    
  0.579
APZ42_027415
Protein argonaute-1; Belongs to the argonaute family.
    
  0.575
APZ42_012837
Protein argonaute-1.
    
  0.575
APZ42_023266
CUB and sushi domain-containing protein 1.
    
  0.568
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.