STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_013507Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
APZ42_011724
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.965
APZ42_017810
Putative Cyclin-L1; Belongs to the cyclin family.
   
 0.911
APZ42_026099
Protein unc-79.
    
 0.880
APZ42_020719
AHD domain-containing protein.
    
 0.863
APZ42_002941
RNA polymerase II elongation factor ELL.
   
 0.862
APZ42_023368
RNA polymerase II elongation factor ELL-like protein.
   
 0.862
APZ42_022083
Putative RNA polymerase II elongation factor ELL.
   
 0.862
APZ42_033871
Leucine-rich repeat kinase.
    
 0.845
APZ42_031762
E3 SUMO-protein ligase RanBP2.
   
 0.791
APZ42_012093
DNA-directed RNA polymerase II subunit RPB3.
    
  0.751
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.