STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_012798Tropomodulin-1-like protein. (95 aa)    
Predicted Functional Partners:
APZ42_011061
Myosin essential light chain.
   
 
 0.785
APZ42_027032
Putative LIM and SH3 domain protein Lasp.
   
 0.751
APZ42_013827
Alpha-actinin, sarcomeric.
   
 
 0.739
APZ42_025903
Tropomyosin-1-like protein.
   
 0.707
APZ42_019272
Tropomyosin-1.
   
 0.707
APZ42_022783
Nonmuscle myosin essential light chain.
   
 
 0.699
APZ42_022226
Vinculin.
     
 0.660
APZ42_015072
Troponin T.
   
 
 0.656
APZ42_011326
Myosin regulatory light chain 2 smooth muscle.
   
 
 0.644
APZ42_025392
Myosin regulatory light chain.
   
 
 0.644
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.