STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_012837Protein argonaute-1. (925 aa)    
Predicted Functional Partners:
APZ42_016910
RRM domain-containing protein.
    
 0.976
APZ42_026328
Loquacious.
    
 0.965
APZ42_025393
Endoribonuclease Dcr-1.
    
 0.872
APZ42_031073
Putative Double-stranded RNA-binding protein Staufen.
    
 0.850
APZ42_019495
Uncharacterized protein.
    
 0.850
APZ42_020410
Ribonuclease 3.
    
 0.844
APZ42_032147
Uncharacterized protein.
    
 0.831
APZ42_020395
Helicase ATP-binding domain-containing protein.
    
 0.831
APZ42_008024
Putative Endoribonuclease dcr-1.
    
 0.818
APZ42_009511
Dicer dsRNA-binding fold domain-containing protein.
    
 0.818
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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