STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOG090X03QTPhenylalanine--tRNA ligase beta subunit. (589 aa)    
Predicted Functional Partners:
APZ42_018675
Phenylalanine--tRNA ligase, mitochondrial.
  
 0.999
APZ42_033597
Phenylalanine--tRNA ligase alpha subunit.
  
 0.999
APZ42_031988
Ferredoxin-fold anticodon-binding domain-containing 1-like protein.
  
 0.997
APZ42_010917
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.985
APZ42_019806
Tyrosine--tRNA ligase.
  
  
 0.973
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.952
APZ42_034294
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.936
APZ42_029688
40S ribosomal protein S3.
  
 
 0.926
APZ42_020698
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.911
APZ42_030838
Isoleucyl-tRNA synthetase, cytoplasmic protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.906
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.