STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_012094Nitric oxide-associated protein 1. (737 aa)    
Predicted Functional Partners:
APZ42_026864
28S ribosomal protein S27.
   
 
 0.958
APZ42_020932
GTPase Era, mitochondrial.
  
 
 0.943
EOG090X05E6
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.929
APZ42_033990
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
   0.920
EOG090X02QX
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.917
APZ42_033665
Putative rRNA-processing protein EBP2.
   
 0.913
APZ42_032025
Ribosome biogenesis protein WDR12.
   
 0.910
APZ42_000935
Ribosome biogenesis protein BOP1.
   
 0.896
APZ42_022003
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.896
APZ42_000752
28S ribosomal protein S9.
   
 
 0.872
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.