STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_011381Ras-related protein Rab-32. (617 aa)    
Predicted Functional Partners:
APZ42_020194
Putative Osteoclast-stimulating factor 1.
    
 
 0.900
APZ42_018802
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.827
APZ42_021219
Rab proteins geranylgeranyltransferase component A.
    
 0.780
APZ42_028960
Cyclin-G-associated kinase.
    
 
 0.760
APZ42_033871
Leucine-rich repeat kinase.
    
 
 0.603
APZ42_016296
Complement component 1 Q subcomponent-binding protein, mitochondrial.
      
 0.577
EOG090X00QE
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
      
 0.519
APZ42_020115
Rab5 GDP/GTP exchange factor.
    
 
 0.517
APZ42_020436
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
      
 0.514
APZ42_016799
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
      
 0.428
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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