STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_011479Putative Homeobox protein prophet of Pit-1. (371 aa)    
Predicted Functional Partners:
APZ42_018322
Serum response factor-like protein.
    
 0.600
APZ42_018361
Regulators of stationary/sporulation gene expression domain-containing protein.
    
 0.600
APZ42_028043
LIM/homeobox protein Lhx4.
    
 0.584
APZ42_033712
Homeobox protein engrailed-like.
    
 
0.560
APZ42_033710
Homeobox protein engrailed-like.
    
 
0.560
APZ42_010864
Nuclear receptor subfamily 4 group A member.
      
 0.545
APZ42_018405
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.522
APZ42_015260
Transcription factor collier.
   
 
 0.504
APZ42_012864
POU domain protein.
   
 
 0.461
APZ42_002871
Uncharacterized protein.
    
  0.440
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.