STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_011695Ubiquitin protein 4A. (133 aa)    
Predicted Functional Partners:
APZ42_032694
Uncharacterized protein.
    
 0.997
APZ42_022927
Baculoviral IAP repeat-containing protein 6.
    
 0.996
APZ42_032869
UBX domain-containing protein 7.
    
 0.992
APZ42_033871
Leucine-rich repeat kinase.
    
 0.992
APZ42_031912
Putative ATP-dependent RNA helicase DHX58.
   
 0.989
APZ42_016773
Enoyl-CoA delta isomerase 2, mitochondrial.
    
 0.981
APZ42_013258
ACB domain-containing protein.
    
 0.981
APZ42_022859
UV excision repair RAD23 A-like protein.
    
 0.981
APZ42_020115
Rab5 GDP/GTP exchange factor.
    
 0.979
APZ42_023861
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.978
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.