STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_011037Regulator of nonsense transcripts 2. (1060 aa)    
Predicted Functional Partners:
APZ42_028676
RNA-binding with serine-rich domain-like protein.
    
 0.999
APZ42_012150
Smg4_UPF3 domain-containing protein.
   
 0.999
APZ42_011505
Regulator of nonsense transcripts 1.
   
 0.996
APZ42_033979
Serine/arginine repetitive matrix 1-like protein.
    
 
 0.974
APZ42_018033
Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.
   
 
 0.957
APZ42_013106
Putative Serine/threonine-protein kinase SMG1.
   
 
 0.957
APZ42_011581
Polyadenylate-binding protein 2.
    
 0.925
APZ42_016309
Protein CASC3-like protein.
    
 0.915
APZ42_017009
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
    
 0.877
APZ42_023090
Protein mago nashi.
     
 0.852
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.