STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_011034Choline-phosphate cytidylyltransferase B. (267 aa)    
Predicted Functional Partners:
APZ42_032452
Choline/ethanolamine kinase.
     
 0.831
APZ42_025850
Phosphoethanolamine N-methyltransferase.
  
 
 0.822
APZ42_030162
Choline/ethanolaminephosphotransferase 1.
     
 0.752
APZ42_023824
Choline/ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.752
APZ42_014118
Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.737
APZ42_028068
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
  
 
 0.710
APZ42_018034
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
  
 
 0.710
APZ42_027115
Putative SMC6, structural maintenance of chromosome protein 6, copy B.
   
 0.706
APZ42_019186
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
 0.683
APZ42_025545
Haloacid dehalogenase-like hydrolase domain-containing protein 3.
  
 
 0.682
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.