STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_005041Sarcolemmal membrane-associated protein sarcolemmal-associated protein. (100 aa)    
Predicted Functional Partners:
APZ42_026099
Protein unc-79.
    
 0.880
APZ42_033871
Leucine-rich repeat kinase.
    
 0.845
APZ42_031762
E3 SUMO-protein ligase RanBP2.
    
 0.782
EOG090X04Y3
Retinoblastoma-binding protein 5.
    
 0.727
APZ42_023536
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.727
APZ42_031573
Putative E3 ubiquitin-protein ligase RNF182.
    
 0.709
APZ42_026668
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.707
APZ42_022409
Nuclear pore complex protein Nup133.
    
 0.702
APZ42_003369
ANK_REP_REGION domain-containing protein.
    
 0.685
APZ42_028532
Complement C1q tumor necrosis factor-related 7-like protein.
    
  0.654
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.