STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_004087Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
APZ42_011850
Elongation factor 1-gamma; Belongs to the GST superfamily.
    
 0.647
APZ42_033986
Integrator complex subunit 9.
    
 0.618
APZ42_032689
Integrator 1.
    
 0.617
APZ42_013459
Integrator complex subunit 11.
    
 0.615
APZ42_028740
Integrator complex subunit 4.
    
 0.613
EOG090X0205
Integrator complex subunit 3.
    
 0.611
APZ42_024917
Integrator complex subunit 7.
    
 0.611
APZ42_030793
Protein asunder.
    
 0.610
APZ42_024748
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA protein.
    
 0.599
APZ42_019065
Putative Oxidoreductase GLYR1.
    
 0.595
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.