STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_003151Putative Glutamyl-tRNA amidotransferase subunit A. (116 aa)    
Predicted Functional Partners:
APZ42_029982
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.997
APZ42_010917
Bifunctional glutamate/proline--tRNA ligase.
  
 0.947
APZ42_020463
Putative Glutamate--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.885
APZ42_024146
Glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.881
APZ42_033267
Asparaginyl-tRNA synthetase.
   
 0.869
APZ42_017257
Cytochrome c oxidase subunit 6A, mitochondrial.
    
 0.813
APZ42_015088
Structure-specific endonuclease subunit SLX4.
   
 0.813
APZ42_020543
Asparaginyl-tRNA synthetase.
   
 0.813
APZ42_025749
60S ribosomal L39-like protein.
  
 0.799
APZ42_033298
Putative DNA polymerase gamma 35kD.
    
 0.798
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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