STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_002277Putative Abc transporter. (106 aa)    
Predicted Functional Partners:
APZ42_005875
Putative Abc transporter.
  
 
  0.750
APZ42_003079
Putative ATP-binding cassette sub-family A member 1.
  
 
  0.710
APZ42_012084
Acetyl-CoA carboxylase.
   
 0.644
APZ42_012087
Acetyl-CoA carboxylase.
   
 0.644
APZ42_022906
Inositol 1,4,5-trisphosphate receptor type.
    
 0.622
APZ42_016450
Putative Transcription initiation factor TFIID subunit 4.
    
 0.616
APZ42_024490
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
  0.616
APZ42_029329
Putative Huntingtin interacting protein 1.
    
 0.616
APZ42_003320
Putative Huntingtin-interacting protein 1.
    
 0.616
APZ42_033871
Leucine-rich repeat kinase.
    
 0.608
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.