STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_001810Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
APZ42_010917
Bifunctional glutamate/proline--tRNA ligase.
  
  
 0.830
APZ42_001868
Glycyl-tRNA synthetase alpha subunit.
  
  
  0.809
APZ42_019390
Glycine--tRNA ligase.
    
 0.754
APZ42_025540
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.722
APZ42_032136
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.691
APZ42_030994
Putative Leucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.605
APZ42_013101
Integrase catalytic domain-containing protein.
   
  
 0.605
APZ42_033468
Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.605
APZ42_009332
Aspartyl-tRNA synthetase.
  
  
 0.585
APZ42_020494
Putative Aspartyl-tRNA synthetase.
  
  
 0.585
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.