STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_034095Putative Glutamate receptor; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (486 aa)    
Predicted Functional Partners:
APZ42_022751
Glutamate receptor.
 
      0.897
APZ42_030566
NMDA receptor 2; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.646
APZ42_012137
Glutamate receptor ionotropic, NMDA.
   
0.634
APZ42_020981
Disks large 1 tumor suppressor protein; Belongs to the MAGUK family.
    
 0.628
APZ42_012188
Glutamate receptor ionotropic, delta-1.
    
0.611
APZ42_014717
Glutamate receptor.
 
     0.561
APZ42_030388
Uncharacterized protein.
    
  0.555
APZ42_023214
Uncharacterized protein.
    
  0.555
APZ42_014481
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
     
 0.485
APZ42_032159
PBPe domain-containing protein.
    
  0.474
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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