STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_034122Putative Translational activator GCN1. (2867 aa)    
Predicted Functional Partners:
APZ42_013171
ABC protein, subfamily ABCF.
   
 
 0.959
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.945
APZ42_018462
Translational activator GCN1.
 
    
0.914
APZ42_023902
Developmentally-regulated GTP-binding protein 2.
   
 
 0.910
APZ42_013004
Putative Tetratricopeptide repeat protein 28.
 
      0.900
APZ42_029688
40S ribosomal protein S3.
   
   0.895
APZ42_022724
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.895
APZ42_020698
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.895
APZ42_004897
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.887
APZ42_007546
40S ribosomal protein S9.
   
 
 0.885
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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