STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_034131Structural maintenance of chromosomes protein 5. (826 aa)    
Predicted Functional Partners:
APZ42_017888
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.979
APZ42_002767
Non-structural maintenance of chromosomes element 1.
    
 0.977
APZ42_022940
MAGE domain-containing protein.
   
 0.967
APZ42_015706
Putative SMC6, structural maintenance of chromosome protein 6, copy A.
   
 0.945
APZ42_003107
Putative SMC6, structural maintenance of chromosome protein 6, copy B.
   
 0.945
APZ42_010950
Double-strand-break repair protein rad21.
   
 0.894
APZ42_023864
Nipped-B protein.
   
 0.889
APZ42_015224
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 0.888
APZ42_018091
Pds5.
   
 0.887
APZ42_029033
Stromal antigen, copy A-like protein.
   
 0.882
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.