STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_034036SECA_MOTOR_DEAD domain-containing protein. (1698 aa)    
Predicted Functional Partners:
APZ42_021806
RNA polymerase II-associated factor 1.
    
  0.655
APZ42_011517
Parafibromin.
    
 0.642
APZ42_025279
Putative Low density lipoprotein receptor adapter protein 1.
   
 0.617
APZ42_015050
Cyclin-dependent kinase 2-interacting protein.
    
 0.577
APZ42_034474
RNA polymerase-associated protein CTR9.
    
 0.577
APZ42_018461
C3 and PZP alpha-2-macroglobulin domain-containing protein 8.
    
  0.541
APZ42_028438
CD109 antigen-like protein.
    
  0.541
APZ42_025536
TEP1 protein.
    
  0.541
APZ42_015544
C3 and PZP alpha-2-macroglobulin domain-containing protein 8.
    
  0.541
APZ42_015533
CD109 antigen.
    
  0.541
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.