STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_033699ATP-dependent Clp protease proteolytic subunit. (237 aa)    
Predicted Functional Partners:
APZ42_002112
LON Protease.
 0.998
APZ42_026727
ATP-dependent Clp protease ATP-binding subunit clpX, mitochondrial-like protein.
 0.998
APZ42_015042
Caseinolytic peptidase B protein suppressor of potassium transport defect.
  
 
 0.997
APZ42_022619
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.891
APZ42_022730
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
  
 
 0.889
APZ42_028323
NADH dehydrogenase iron-sulfur protein 7; Belongs to the complex I 20 kDa subunit family.
   
 
 0.886
APZ42_033594
Paralyzed arrest AT two-FolD protein 6.
 
      0.847
APZ42_020659
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
  
  
 0.815
APZ42_028322
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
  
 
 0.793
APZ42_002249
LON Protease-like protein.
  
 
 0.793
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.