STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_031618Integrase catalytic domain-containing protein. (1317 aa)    
Predicted Functional Partners:
APZ42_031912
Putative ATP-dependent RNA helicase DHX58.
    
  0.797
APZ42_010959
Uncharacterized protein.
  
  
 
0.497
APZ42_033933
Integrase catalytic domain-containing protein.
  
  
 
0.493
APZ42_027712
Integrase catalytic domain-containing protein.
  
  
 
0.493
APZ42_018258
Uncharacterized protein.
  
  
 
0.492
APZ42_012348
Uncharacterized protein.
  
  
 
0.491
APZ42_029823
Integrase catalytic domain-containing protein.
  
  
 
0.491
APZ42_025362
Integrase catalytic domain-containing protein.
  
  
 
0.491
APZ42_012712
Uncharacterized protein.
  
  
 
0.490
APZ42_031097
Uncharacterized protein.
  
  
 
0.490
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.